Publikacje

1. D. Warszycki, S. Mordalski, K. Kristiansen, R. Kafel, I. Sylte, Z. Chilmonczyk, A.J. Bojarski “A Linear Combination of Pharmacophore Hypotheses as a New Tool in Search of New Active Compounds – An Application for 5-HT1A Receptor Ligands” PLoS ONE, 2013, 8, e84510
(http://www.ncbi.nlm.nih.gov/pubmed/24367669)

2. Z. Chilmonczyk, A.J. Bojarski, I. Sylte “Ligand-directed trafficking of receptor stimulus.” Pharm. Rep. 2014, 66, 1011-1021
(http://www.ncbi.nlm.nih.gov/pubmed/25443729)

3. Smusz, S.; Czarnecki, W.; Warszycki, D.; Bojarski, A.J. “Exploiting uncertainty measures in compounds activity prediction using support vector machines.” Bioorg. Med. Chem. Lett. 2014, 25, 100-105
(http://www.ncbi.nlm.nih.gov/pubmed/25466199)

4. Warszycki, D.; Staroń, J.; Mordalski, S.; Bojarski, A.J. “Bioisosteric Matrices for Ligands of Serotonin Receptors.” ChemMedChem 2015, 10, 601-605
(http://www.ncbi.nlm.nih.gov/pubmed/25772514)

5. Smusz, S.; Kurczab, R.; Satała, G.; Bojarski, A.J. “Fingerprint-based consensus virtual screening towards structurally new 5-HT6R ligands” Bioorg. Med. Chem. Lett. 2015, 25, 1827-1830
(http://www.ncbi.nlm.nih.gov/pubmed/25866241)

6. Chilmonczyk, Z.; Bojarski, A. J.; Pilc, A.; Sylte, I. “Functional Selectivity and Antidepressant Activity of Serotonin 1A Receptor Ligands.” Int. J Mol. Sci. 2015, 16, 18474-18506.
(http://www.ncbi.nlm.nih.gov/pubmed/26262615)

7. Kurczab, R.; Canale, V.; Zajdel, P.; Bojarski, A.J. “An Algorithm to Identify Target-Selective Ligands – A Case Study of 5-HT7/5-HT1A Receptor Selectivity.” PLoS One 2016, 11(6):e0156986
(http://www.ncbi.nlm.nih.gov/pubmed/27271158)

8. Staroń, J.; Warszycki, D.; Kurczab, R.; Satała, G.; Bugno, R.; Hogendorf, A.; Bojarski, A.J. “Halogen bonding enhances activity in a series of dual 5-HT6/D2 ligands designed in a hybrid bioisostere generation/virtual screening protocol.” RSC Adv. 2016, 6, 54918–54925
(http://pubs.rsc.org/en/Content/ArticleLanding/2016/RA/c6ra08714k#!divAbstract)

9. Warszycki, D.; Rueda, M.; Mordalski, S.; Kristiansen, K.; Satala, G.; Rataj, K.; Chilmonczyk, Z.; Sylte, I.; Abagyan, R.; Bojarski, A. J. „From Homology Models to a Set of Predictive Binding Pockets – a 5-HT1A Receptor Case Study” J. Chem. Inf. Model. 2017, 57, 311-321
(https://www.ncbi.nlm.nih.gov/pubmed/28055203)

10. Freyd, T.; Warszycki, D.; Mordalski, S.; Bojarski, A. J.; Sylte, I.; Gabrielsen, M. “Ligand-guided homology modelling of the GABAB2 subunit of the GABAB receptor” PLoS One 2017, 12, e0173889
(https://www.ncbi.nlm.nih.gov/pubmed/28323850)

11. Chilmonczyk, Z.; Bojarski, A. J.; Pilc, A.; Sylte, I. “Serotonin transporter and receptor ligands with antidepressant activity as neuroprotective and proapoptotic agents” Pharmacol. Rep. 2017, 69, 469-478
(https://www.ncbi.nlm.nih.gov/pubmed/28324844)

12. Kurczab, R.; Bojarski, A. J. “The influence of the negative-positive ratio and screening database size on the performance of machine learning-based virtual screening” PLoS One 2017, 12, e0175410
(https://www.ncbi.nlm.nih.gov/pubmed/28384344)

13. Warszycki, D.; Śmieja, M.; Kafel, R. “Practical application of the Average Information Content Maximization (AIC-MAX) algorithm: selection of the most important structural features for serotonin receptor ligands” Mol Divers. 2017, 2017 Feb 9
(https://www.ncbi.nlm.nih.gov/pubmed/28185036)

14. Hogendorf, A. S.; Hogendorf, A.; Kurczab, R.; Satala, G. ; Lenda, T.; Walczak, M.; Latacz, G.; Handzlik, J.; Kiec-Kononowicz, K.; Wieronska, J. M.; Wozniak, M.; Cieslik, P.; Bugno, R.; Staron, J.; Bojarski, A. J. “Low-basicity 5-HT7 Receptor Agonists Synthesized Using the van Leusen Multicomponent Protocol” Sci. Rep. 2017, 7, 1444
(https://www.nature.com/articles/s41598-017-00822-4)